research▌
311 indexed skills · max 10 per page
scikit-bio
K-Dense-AI/scientific-agent-skills · Science
### Scikit Bio - name: "scikit-bio" - description: "Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis." - allowed-tools: "Read Write Edit Bash"
umap-learn
K-Dense-AI/scientific-agent-skills · Science
### Umap Learn - name: "umap-learn" - description: "UMAP dimensionality reduction. Fast nonlinear manifold learning for 2D/3D visualization, clustering preprocessing (HDBSCAN), supervised/parametric UMAP, for high-dimensional data."
treatment-plans
K-Dense-AI/scientific-agent-skills · Science
### Treatment Plans - name: "treatment-plans" - description: "Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic d..." - allowed-tools: "Read Write Edit Bash"
statsmodels
K-Dense-AI/scientific-agent-skills · Science
### Statsmodels - name: "statsmodels" - description: "Statistical models library for Python. Use when you need specific model classes (OLS, GLM, mixed models, ARIMA) with detailed diagnostics, residuals, and inference. Best for econometrics, time series,..."
tiledbvcf
K-Dense-AI/scientific-agent-skills · Science
### Tiledbvcf - name: "tiledbvcf" - description: "Efficient storage and retrieval of genomic variant data using TileDB. Scalable VCF/BCF ingestion, incremental sample addition, compressed storage, parallel queries, and export capabilities for populat..."
seaborn
K-Dense-AI/scientific-agent-skills · Science
### Seaborn - name: "seaborn" - description: "Statistical visualization with pandas integration. Use for quick exploration of distributions, relationships, and categorical comparisons with attractive defaults. Best for box plots, violin plots, pa..."
timesfm-forecasting
K-Dense-AI/scientific-agent-skills · Science
### Timesfm Forecasting - name: "timesfm-forecasting" - description: "Zero-shot time series forecasting with Google's TimesFM foundation model. Use for any univariate time series (sales, sensors, energy, vitals, weather) without training a custom model. Supports CSV/Dat..." - allowed-tools: "Read Write Edit Bash"
scikit-survival
K-Dense-AI/scientific-agent-skills · Science
### Scikit Survival - name: "scikit-survival" - description: "Comprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival. Use this skill when working with censored survival data, performing time-to-event analysis, fitt..."
torchdrug
K-Dense-AI/scientific-agent-skills · Science
### Torchdrug - name: "torchdrug" - description: "PyTorch-native graph neural networks for molecules and proteins. Use when building custom GNN architectures for drug discovery, protein modeling, or knowledge graph reasoning. Best for custom model de..."
stable-baselines3
K-Dense-AI/scientific-agent-skills · Science
### Stable Baselines3 - name: "stable-baselines3" - description: "Production-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick prototyping, and well-documented algorithm impleme..." - allowed-tools: "Read Write Edit Bash"