research▌

### Matplotlib - name: "matplotlib" - description: "Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integrating with specific scientific workflows. Export ..."

### Liteparse - name: "liteparse" - description: "Local document and PDF parsing with spatial text and bounding boxes. Use for extracting text from PDFs, DOCX, Office files, and images; OCR on scans; layout-preserved JSON for RAG; batch-ingesting pap..." - allowed-tools: "Read Write Edit Bash"

### Datamol - name: "datamol" - description: "Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery including SMILES parsing, standardization, descriptors, fingerprints, clustering, 3..." - allowed-tools: "Read Write Edit Bash"

### Dnanexus Integration - name: "dnanexus-integration" - description: "DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution."

### Markitdown - name: "markitdown" - description: "Convert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more." - allowed-tools: "Read Write Edit Bash"

### Market Research Reports - name: "market-research-reports" - description: "Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scien..." - allowed-tools: "Read Write Edit Bash"

### Diffdock - name: "diffdock" - description: "Diffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual screening, for structure-based drug design. Not for affinity prediction."

### Labarchive Integration - name: "labarchive-integration" - description: "Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with Protocols.io/Jupyter/REDCap, for programmatic ELN workflows."

### Dhdna Profiler - name: "dhdna-profiler" - description: "Extract cognitive patterns and thinking fingerprints from any text. Use this skill when the user wants to analyze how someone thinks, understand cognitive style, profile writing or speech patterns, co..." - allowed-tools: "Read Write"

### Iso 13485 Certification - name: "iso-13485-certification" - description: "Comprehensive toolkit for preparing ISO 13485 certification documentation for medical device Quality Management Systems. Use when users need help with ISO 13485 QMS documentation, including (1) conduc..."