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Pysam is a Python module for reading, manipulating, and writing genomic datasets. Read/write SAM/BAM/CRAM alignment files, VCF/BCF variant files, and FASTA/FASTQ sequences with a…
The Metabolomics Workbench is a comprehensive NIH Common Fund-sponsored platform hosted at UCSD that serves as the primary repository for metabolomics research data. It provides p…
AnnData is a Python package for handling annotated data matrices, storing experimental measurements (X) alongside observation metadata (obs), variable metadata (var), and multi-di…
scvi-tools is a comprehensive Python framework for probabilistic models in single-cell genomics. Built on PyTorch and PyTorch Lightning, it provides deep generative models using v…
A toolkit providing utilities and knowledge for creating animated GIFs optimized for Slack.
Use the Figma MCP server for Figma-driven implementation. For setup and debugging details (env vars, config, verification), see references/figma-mcp-config.md.
The GWAS Catalog is a comprehensive repository of published genome-wide association studies maintained by the National Human Genome Research Institute (NHGRI) and the European Bio…
FluidSim is an object-oriented Python framework for high-performance computational fluid dynamics (CFD) simulations. It provides solvers for periodic-domain equations using pseudo…
Expert-level quality management system auditing with comprehensive knowledge of ISO 13485, audit methodologies, nonconformity management, and audit program optimization for medica…
Astropy is the core Python package for astronomy, providing essential functionality for astronomical research and data analysis. Use astropy for coordinate transformations, unit a…
