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A curated index of scientific datasets, models, and demos for AI/ML research in various scientific domains.

Analyze and engineer protein glycosylation for therapeutic antibody optimization and vaccine design.

Submit and manage protocols on Ginkgo Bioworks Cloud Lab for autonomous lab execution on Reconfigurable Automation Carts.

Fast CLI/Python queries to 20+ bioinformatics databases for gene info, BLAST searches, and more.

A toolkit for phylogenetic tree manipulation, analysis, and visualization, integrating with biological databases for phylogenomics.

Comprehensive toolkit for protein language models including ESM3 and ESM C for protein design and embeddings.

DiffDock is a diffusion-based deep learning tool for predicting protein-ligand binding poses, crucial for structure-based drug discovery.

Extract cognitive patterns and thinking fingerprints from any text to analyze reasoning and decision-making styles.

Query the Cancer Dependency Map for gene dependency scores, drug sensitivity data, and gene effect profiles.

COBRApy is a Python library for constraint-based metabolic modeling, essential for systems biology research and metabolic engineering analysis.