k-dense▌
143 indexed skills · max 10 per page
qiskit
K-Dense-AI/scientific-agent-skills · Science
### Qiskit - name: "qiskit" - description: "IBM quantum computing framework. Use when targeting IBM Quantum hardware, working with Qiskit Runtime for production workloads, or needing IBM optimization tools. Best for IBM hardware execution, quan..."
research-grants
K-Dense-AI/scientific-agent-skills · Science
### Research Grants - name: "research-grants" - description: "Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC. Agency-specific formatting, review criteria, budget preparation, broader impacts, significance statements, innovation na..." - allowed-tools: "Read Write Edit Bash"
pyzotero
K-Dense-AI/scientific-agent-skills · Science
### Pyzotero - name: "pyzotero" - description: "Interact with Zotero reference management libraries using the pyzotero Python client. Retrieve, create, update, and delete items, collections, tags, and attachments via the Zotero Web API v3. Use this..." - allowed-tools: "Read Write Edit Bash"
research-lookup
K-Dense-AI/scientific-agent-skills · Science
### Research Lookup - name: "research-lookup" - description: "Look up current research information using parallel-cli search (primary, fast web search), the Parallel Chat API (deep research), or Perplexity sonar-pro-search (academic paper searches). Automaticall..." - allowed-tools: "Read Write Edit Bash"
rdkit
K-Dense-AI/scientific-agent-skills · Science
### Rdkit - name: "rdkit" - description: "Cheminformatics toolkit for fine-grained molecular control. SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure search, 2D/3D generation, similarity, reactions. For standard w..."
pytorch-lightning
K-Dense-AI/scientific-agent-skills · Science
### Pytorch Lightning - name: "pytorch-lightning" - description: "Deep learning framework (PyTorch Lightning / lightning package). Organize PyTorch code into LightningModules, configure Trainers for multi-GPU/TPU, implement data pipelines, callbacks, logging (W&B, T..." - allowed-tools: "Read Write Edit Bash"
pysam
K-Dense-AI/scientific-agent-skills · Science
### Pysam - name: "pysam" - description: "Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines."
pyhealth
K-Dense-AI/scientific-agent-skills · Science
### Pyhealth - name: "pyhealth" - description: "Build clinical/healthcare deep-learning pipelines with PyHealth — loading EHR/signal/imaging datasets (MIMIC-III/IV, eICU, OMOP, SleepEDF, ChestXray14, EHRShot), defining tasks (mortality, readmission..."
pytdc
K-Dense-AI/scientific-agent-skills · Science
### Pytdc - name: "pytdc" - description: "Therapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits, molecular oracles, for therapeutic ML and pharmacological prediction."
pydicom
K-Dense-AI/scientific-agent-skills · Science
### Pydicom - name: "pydicom" - description: "Python library for working with DICOM (Digital Imaging and Communications in Medicine) files. Use this skill when reading, writing, or modifying medical imaging data in DICOM format, extracting pixel ..."